Table S3.21. Fragment 21 interactions with Arg |
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Listed below are the
ligands in the PDB that contain the chemical fragment shown on the
left and which interact via this fragment with the side chain of a
Arg residue via hydrogen bonds.
The PDB codes are hyperlinked to a schematic LIGPLOT diagram in PDBsum. |
Ligand | Description | |||||||||||||||||||||||
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1. Ligand: VDX 5-{2-[1-(5-hydroxy-1,5-dimethyl-hexyl)-7a-methyl-octahydro-inden-4-ylidene]-ethylidene}-4-methylene- cyclohexane-1,3-diol PDB codes: 2zbz, 3cv9. |
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2. Ligand: C33 2alpha-propyl-1alpha,25-dihydroxyvitamin d3 PDB code: 2ham. |
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3. Ligand: COV (1s,3r,5z,7e,14beta,17alpha)-17-[(2s,4s)-4-(2-hydroxy-2-methylpropyl)-2-methyltetrahydrofuran-2-yl]- 9,10-secoandrosta-5,7,10-triene-1,3-diol PDB code: 3cs4. |
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4. Ligand: INS 1,2,3,4,5,6-hexahydroxy-cyclohexane PDB code: 3bxd. |
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5. Ligand: NYA (1r,3r,7e,17beta)-17-{(1r,2e,4r)-4-hydroxy-1-methyl-4-[(3s,5s,7s)-tricyclo[3.3.1.1~3,7~]dec-1- yl]but-2-en-1-yl}-2-methylidene-9,10-secoestra-5,7-diene-1,3-diol PDB code: 2zmh. |
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6. Ligand: O1C 2alpha-(3-hydroxypropyl)-1alpha,25-dihydroxyvitamin d3 PDB code: 2hb7. |
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7. Ligand: OCC 2alpha-(3-hydroxypropoxy)-1alpha,25-dihydroxyvitamin d3 PDB code: 2har. |
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8. Ligand: TT2 (1r,3r,7e,17beta)-17-{(1s,2e,5r)-5-hydroxy-1-methyl-5-[(3s,5s,7s)-tricyclo[3.3.1.1~3,7~]dec-1- yl]pent-2-en-1-yl}-2-methylidene-9,10-secoestra-5,7-diene-1,3-diol PDB code: 2zmi. |
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9. Ligand: VD4 (1r,3r,7e,17z)-17-(5-hydroxy-1,5-dimethylhexylidene)-2-methylene-9,10-secoestra-5,7-diene-1,3-diol PDB code: 2o4j. |
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10. Ligand: VDB (1r,2s,3r,5z,7e)-17-{(1r)-1-[(2-ethyl-2-hydroxybutyl)sulfanyl]ethyl}-2-(2-hydroxyethoxy)-9,10- secoestra-5,7,16-triene-1,3-diol PDB code: 2zla. |
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11. Ligand: VDZ 5-{2-[1-(5-hydroxy-1,5-dimethyl-hexyl)-7a-methyl-octahydro-inden-4-ylidene]-ethylidene}-2-methylene- cyclohexane-1,3-diol PDB code: 1rjk. |
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