Table S2.11. Fragment 11 interactions with Glu

Fragment 11
Listed below are the ligands in the PDB that contain the chemical fragment shown on the left and which interact via this fragment with the side chain of a Glu residue via hydrogen bonds.

The PDB codes are hyperlinked to a schematic LIGPLOT diagram in PDBsum.

Ligand Description


  1. Ligand: SRP
Seryl adenylate
PDB code: 1wle.


  2. Ligand: ZEA
(2e)-2-methyl-4-(9h-purin-6-ylamino)but-2-en-1-ol
PDB codes: 1w1r, 2flh, 2qim, 3c0v.


  3. Ligand: 301
N6-(penta-2,3-dienyl)adenine
PDB code: 3bw7.


  4. Ligand: 9PP
2,6-diamino-(s)-9-[2-(phosphonomethoxy)propyl]purine
PDB code: 1lvu.


  5. Ligand: ADE
Adenine
PDB codes: 1jh8, 1mud.


  6. Ligand: ADK
3-methyl-3h-purin-6-ylamine
PDB code: 2ofi.


  7. Ligand: ADN
Adenosine
PDB code: 2pgf.


  8. Ligand: AMP
Adenosine monophosphate
PDB codes: 1ua4, 2cfm, 3feg.


  9. Ligand: GRD
benzyl (S)-1-((2s,3s)-1-(3-(6-amino-9h-purin-9-yl)propylamino)-2-hydroxy-1-oxopentan-3-ylamino)-4-
methyl-1-oxopentan-2-ylcarbamate
PDB code: 2r9c.


  10. Ligand: NOC
3-(6-amino-purin-9-yl)-5-hydroxymethyl-cyclopentane-1,2-diol
PDB code: 1li4.


  11. Ligand: SFG
Adenosyl-ornithine
PDB code: 3cbp.


  12. Ligand: SSA
5'-o-(n-(l-seryl)-sulfamoyl)adenosine
PDB code: 1fyf.


  13. Ligand: TSB
5'-o-(n-(l-threonyl)-sulfamoyl)adenosine
PDB code: 1evl.


  14. Ligand: ZIP
N-(3-methylbut-2-en-1-yl)-9h-purin-6-amine
PDB code: 1w1q.