Table S2.37. Fragment 37 interactions with Glu

Fragment 37
Listed below are the ligands in the PDB that contain the chemical fragment shown on the left and which interact via this fragment with the side chain of a Glu residue via hydrogen bonds.

The PDB codes are hyperlinked to a schematic LIGPLOT diagram in PDBsum.

Ligand Description


  1. Ligand: 2AF
2-aminophenol
PDB code: 1l4n.


  2. Ligand: 4AA
4-chloro-3-hydroxyanthranilic acid
PDB code: 1yfx.


  3. Ligand: BP3
2'-chloro-biphenyl-2,3-diol
PDB code: 1lgt.


  4. Ligand: BP6
2',6'-dichloro-biphenyl-2,6-diol
PDB code: 1lkd.


  5. Ligand: BPY
Biphenyl-2,3-diol
PDB codes: 1eir, 1kmy, 1kw6, 1kw8, 1kw9, 1kwc.


  6. Ligand: DH2
(2s,3s)-2-(3,4-dihydroxyphenyl)-3,5,7-trihydroxy-2,3-dihydro-4h-chromen-4-one
PDB code: 1gp6.


  7. Ligand: DHY
2-(3,4-dihydroxyphenyl)acetic acid
PDB codes: 1f1v, 1q0c.


  8. Ligand: E3O
(16alpha,17alpha)-estra-1,3,5(10)-triene-3,16,17-triol
PDB code: 2j7y.


  9. Ligand: EST
Estradiol
PDB codes: 1aqu, 2j7x.


  10. Ligand: HC4
4'-hydroxycinnamic acid
PDB codes: 1d7e, 1f98, 1f9i, 1gsv, 1gsw, 1gsx, 1mzu, 1nwz, 1odv, 1ot9, 1otb, 1otd, 1ts0, 1ts6, 1ts7, 1ts8, 1uwn, 1uwp, 2d01, 2d02, 2phy, 2pyp, 2pyr, 2qj5, 2qj7, 2zoh, 2zoi.


  11. Ligand: MCT
4-methylcatechol
PDB codes: 1l4g, 2ehz.


  12. Ligand: QUE
3,5,7,3',4'-pentahydroxyflavone
PDB code: 1gp6.


  13. Ligand: 17M
17-methyl-17-alpha-dihydroequilenin
PDB code: 2b1z.


  14. Ligand: 196
3-(3-fluoro-4-hydroxyphenyl)-7-hydroxy-1-naphthonitrile
PDB code: 1yye.


  15. Ligand: 1BM
3-{[2-(1h-benzimidazol-1-yl)-6-{[2-(diethylamino)ethyl]amino}pyrimidin-4-yl]amino}-4-methylphenol
PDB code: 2hk5.


  16. Ligand: 1HP
4-(2-amino-1-methyl-1h-imidazo[4,5-b]pyridin-6-yl)phenol
PDB code: 2qse.


  17. Ligand: 1NP
1-naphthol
PDB code: 2zvq.


  18. Ligand: 1OH
4-(1-methyl-1-phenylethyl)phenol
PDB code: 2zas.


  19. Ligand: 2HC
(2e)-3-(2-hydroxyphenyl)acrylic acid
PDB code: 1v5z.


  20. Ligand: 2MP
3,4-dimethylphenol
PDB code: 1l5o.


  21. Ligand: 2OH
4,4'-propane-2,2-diyldiphenol
PDB codes: 2e2r, 2p7g.


  22. Ligand: 3C4
(3-chloro-4-hydroxyphenyl)acetic acid
PDB code: 3e5u.


  23. Ligand: 458
4-[(1s,2s,5s)-5-(hydroxymethyl)-8-methyl-3-oxabicyclo[3.3.1]non-7-en-2-yl]phenol
PDB code: 2b1v.


  24. Ligand: 459
4-[(1s,2s,5s,9r)-5-(hydroxymethyl)-8,9-dimethyl-3-oxabicyclo[3.3.1]non-7-en-2-yl]phenol
PDB code: 2fai.


  25. Ligand: 555
4-(4-hydroxyphenyl)-1-naphthaldehyde oxime
PDB code: 2nv7.


  26. Ligand: AB3
3-(4-amino-1-tert-butyl-1h-pyrazolo[3,4-d]pyrimidin-3-yl)phenol
PDB codes: 1wma, 3bhj, 3bhm.


  27. Ligand: AEJ
(1s)-1-{4-[(9ar)-octahydro-2h-pyrido[1,2-a]pyrazin-2-yl]phenyl}-2-phenyl-1,2,3,4-
tetrahydroisoquinolin-6-ol
PDB code: 1xqc.


  28. Ligand: AIH
(2s,3r)-2-(4-{2-[(3r,4r)-3,4-dimethylpyrrolidin-1-yl]ethoxy}phenyl)-3-(4-hydroxyphenyl)-2,3-dihydro-
1,4-benzoxathiin-6-ol
PDB code: 1xp1.


  29. Ligand: AIJ
(2s,3r)-3-(4-hydroxyphenyl)-2-(4-{[(2s)-2-pyrrolidin-1-ylpropyl]oxy}phenyl)-2,3-dihydro-1,4-
benzoxathiin-6-ol
PDB code: 1xp9.


  30. Ligand: AIT
(2s,3r)-3-(4-hydroxyphenyl)-2-(4-{[(2r)-2-pyrrolidin-1-ylpropyl]oxy}phenyl)-2,3-dihydro-1,4-
benzoxathiin-6-ol
PDB code: 1xpc.


  31. Ligand: AIU
(2s,3r)-2-(4-{2-[(3s,4s)-3,4-dimethylpyrrolidin-1-yl]ethoxy}phenyl)-3-(4-hydroxyphenyl)-2,3-dihydro-
1,4-benzoxathiin-6-ol
PDB code: 1xp6.


  32. Ligand: BA1
Balanol
PDB code: 1bx6.


  33. Ligand: BD2
3-[(4-hydroxybenzoyl)amino]azepan-4-yl 4-(2-hydroxybenzoyl)benzoate
PDB code: 1re8.


  34. Ligand: BIA
1-(3,4,dihydroxy-5-nitrophenyl)-3-{4-[3-(trifluoromethyl) phenyl] piperazin-1-yl}propan-1-one
PDB code: 1h1d.


  35. Ligand: BML
4-bromophenol
PDB code: 3dhh.


  36. Ligand: BPZ
4,4'-cyclohexane-1,1-diyldiphenol
PDB code: 2zkc.


  37. Ligand: C3D
(5r,6s)-6-phenyl-5-[4-(2-pyrrolidin-1-ylethoxy)phenyl]-5,6,7,8-tetrahydronaphthalen-2-ol
PDB code: 2ouz.


  38. Ligand: CAQ
Catechol
PDB code: 1knd.


  39. Ligand: CM4
(2r,3r,4s)-3-(4-hydroxyphenyl)-4-methyl-2-[4-(2-pyrrolidin-1-ylethoxy)phenyl]chroman-6-ol
PDB code: 1yim.


  40. Ligand: DBE
bis(4-hydroxyphenyl)methanone
PDB code: 2vku.


  41. Ligand: DC8
(3as,4r,9br)-2,2-difluoro-4-(4-hydroxyphenyl)-1,2,3,3a,4,9b-hexahydrocyclopenta[c]chromen-8-ol
PDB code: 2q70.


  42. Ligand: DES
Diethylstilbestrol
PDB code: 3erd.


  43. Ligand: DHC
Caffeic acid
PDB code: 1kou.


  44. Ligand: DNC
3,5-dinitrocatechol
PDB codes: 1vid, 3bwm, 3bwy.


  45. Ligand: E4D
(2s,3r)-2-(4-(2-(piperidin-1-yl)ethoxy)phenyl)-2,3-dihydro-3-(4-hydroxyphenyl)benzo[b][1,4]oxathiin-
6-ol
PDB code: 1sj0.


  46. Ligand: EI1
3-ethyl-2-(4-hydroxyphenyl)-2h-indazol-5-ol
PDB code: 2qab.


  47. Ligand: EQU
Equilenin
PDB code: 1cqs.


  48. Ligand: ETC
(R,r)-5,11-cis-diethyl-5,6,11,12-tetrahydrochrysene-2,8-diol
PDB code: 1l2i.


  49. Ligand: EYK
2-tert-butylbenzene-1,4-diol
PDB code: 3eyk.


  50. Ligand: EZT
(17beta)-17-{(e)-2-[2-(trifluoromethyl)phenyl]vinyl}estra-1(10),2,4-triene-3,17-diol
PDB code: 2p15.


  51. Ligand: GEN
Genistein
PDB codes: 1qkm, 1x7r, 2qa8.


  52. Ligand: GNT
(-)-Galanthamine
PDB code: 1w6r.


  53. Ligand: HZ3
dimethyl (1r,4s)-5,6-bis(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hepta-2,5-diene-2,3-dicarboxylate
PDB code: 2qr9.


  54. Ligand: I04
N-{(3r,4r)-4-[4-(2-fluoro-6-hydroxy-3-methoxy-benzoyl)-benzoylamino]-azepan-3-yl}isonicotinamide
PDB code: 1svg.


  55. Ligand: IOG
N-[(1r)-3-(4-hydroxyphenyl)-1-methylpropyl]-2-[2-phenyl-6-(2-piperidin-1-ylethoxy)-1h-indol-3-
yl]acetamide
PDB code: 2iog.


  56. Ligand: IPH
Phenol
PDB codes: 1fjw, 1jhx.


  57. Ligand: KN1
4-[1-allyl-7-(trifluoromethyl)-1h-indazol-3-yl]benzene-1,3-diol
PDB code: 2qzo.


  58. Ligand: L4G
6-(4-methylsulfonyl-phenyl)-5-[4-(2-piperidin-1-ylethoxy)phenoxy]naphthalen-2-ol
PDB code: 2ayr.


  59. Ligand: LLB
[6-hydroxy-2-(4-hydroxyphenyl)-1-benzothien-3-yl]{4-[2-(4-methylpiperidin-1-
yl)ethoxy]phenyl}methanone
PDB code: 2r6w.


  60. Ligand: LLC
[6-hydroxy-2-(4-hydroxyphenyl)-1-benzothien-3-yl][4-(2-pyrrolidin-1-ylethoxy)phenyl]methanone
PDB code: 2r6y.


  61. Ligand: LNR
L-norepinephrine
PDB code: 3dye.


  62. Ligand: MBD
3-methylcatechol
PDB code: 1knf.


  63. Ligand: MGI
methyl 4-(2,3-dihydroxy-5-methylphenoxy)-2-hydroxy-6-methylbenzoate
PDB code: 2za0.


  64. Ligand: OHT
4-hydroxytamoxifen
PDB codes: 2bj4, 2gpu, 2jf9, 3ert.


  65. Ligand: PCR
P-cresol
PDB codes: 1jhu, 1jhv.


  66. Ligand: PHB
P-hydroxybenzoic acid
PDB codes: 1fw9, 1g1b, 1g81, 1jd3, 1q4s, 1tt8.


  67. Ligand: R55
N-[4-({4-[5-(4,4-dimethylpiperidin-1-yl)-2-hydroxybenzoyl]benzoyl}amino)azepan-3-yl]isonicotinamide
PDB code: 1xh8.


  68. Ligand: R69
N-[4-({4-[5-(dimethylamino)-2-hydroxybenzoyl]benzoyl}amino)azepan-3-yl]isonicotinamide
PDB code: 1xh9.


  69. Ligand: R94
N-(4-{[4-(2-hydroxy-5-piperidin-1-ylbenzoyl)benzoyl]amino}azepan-3-yl)isonicotinamide
PDB code: 1xh6.


  70. Ligand: RAL
Raloxifene
PDB code: 2qxs.


  71. Ligand: RCO
Resorcinol
PDB code: 1evr.


  72. Ligand: SHY
4-[(3as,4r,7r,8as,8br)-2-(1,3-benzodioxol-5-ylmethyl)-7-hydroxy-1,3-dioxodecahydropyrrolo[3,4-
a]pyrrolizin-4-yl]benzenecarboximidamide
PDB code: 1vzq.


  73. Ligand: SRO
Serotonin
PDB code: 2qeh.


  74. Ligand: TYB
Tyrosinal
PDB code: 1kdz.


  75. Ligand: VNL
4-hydroxy-3-methoxybenzoate
PDB code: 1xlr.


  76. Ligand: WST
(3as,4r,9br)-4-(4-hydroxyphenyl)-1,2,3,3a,4,9b-hexahydrocyclopenta[c]chromen-9-ol
PDB code: 2pog.


  77. Ligand: YBY
N-{[(1s)-1-carboxy-2-(4-hydroxy-3-iodophenyl)ethyl]carbamoyl}-l-glutamic acid
PDB code: 3d7f.