Table S2.70. Fragment 70 interactions with Glu

Fragment 70
Listed below are the ligands in the PDB that contain the chemical fragment shown on the left and which interact via this fragment with the side chain of a Glu residue via hydrogen bonds.

The PDB codes are hyperlinked to a schematic LIGPLOT diagram in PDBsum.

Ligand Description


  1. Ligand: AAF
Methyl 4-{[({[(2r,5s)-5-{[(2s)-2-(aminomethyl)pyrrolidin-1-yl]carbonyl}pyrrolidin-2-
yl]methyl}amino)carbonyl]amino}benzoate
PDB code: 2g63.


  2. Ligand: BG3
3-methyl-5-sulfo-pyrrolidine-2-carboxylic acid
PDB code: 1tv4.


  3. Ligand: CQP
(4r,2s)-5'-(4-(4-chlorobenzyloxy)pyrrolidin-2-ylmethanesulfonyl)isoquinoline
PDB code: 2c1b.


  4. Ligand: DPR
D-proline
PDB code: 2ej6.


  5. Ligand: JI1
3-({(3s,4s)-4-[(6-aminopyridin-2-yl)methyl]pyrrolidin-3-yl}amino)propan-1-ol
PDB code: 3b3m.


  6. Ligand: JI3
N-{(3s,4s)-4-[(6-amino-4-methylpyridin-2-yl)methyl]pyrrolidin-3-yl}-n'-(4-chlorobenzyl)ethane-1,2-
diamine
PDB code: 3b3o.


  7. Ligand: KAI
3-(carboxymethyl)-4-isopropenylproline
PDB codes: 1ftk, 1lbb, 1p1n, 1tt1, 1xhy, 3c31, 3c32, 3c34, 3c35, 3c36.


  8. Ligand: MNI
N-{[(2r,3r,4r,5r)-3,4-dihydroxy-5-(hydroxymethyl)pyrrolidin-2-yl]methyl}-4-(dimethylamino)benzamide
PDB code: 2oym.


  9. Ligand: PTB
(5-tert-butyl-1,3,4-oxadiazol-2-yl)[(2r)-pyrrolidin-2-yl]methanone
PDB code: 1wm1.


  10. Ligand: X7O
5-amino-3-methyl-pyrrolidine-2-carboxylic acid
PDB code: 1l2q.